Lab Programmes

Assortment of random tools for the lab/bioinformatics/data analysis, all to make life a bit easier and more straightforward

See Github for further details.

Beta
Luminex Data Extractor
Automated data analysis direct from CSV exports

Standalone HTML application for processing of Luminex data CSV files and analysis relative to standards. Provides automated analyte (bead) detection, efficiency calculations on standards, interpolation, hook/low quality standards, and visual plots.

Key Features:
Process direct from Luminex exports
Standard curve validation through 4PL curve, with sample interpolation
Hook effect and low quality standards
Efficiency calculations and interpolation
Launch Tool
Beta
Hamilton Parser
Data parsing for Hamilton

Standalone HTML application for merging Hamilton Decapper and Hamilton liquid handling export files.

Key Features:
Combines multiple Hamilton export files into one unified file
Launch Tool
Alanine Scanning
Protein FASTA sequence mutagenesis tool

Python bioinformatics tool for systematic alanine scanning mutagenesis analysis along a FASTA sequence to generate comprehensive amino acid substitution and sequences. Useful for downstream synthesis/bioinformatics structure-function studies.

Key Features:
FASTA sequence input
Systematic amino acid replacement, single, double and triple mutants
Replaces naturally occurring Ala with Gly
Python
Launch Tool
Beta
File parser for plates
Tool for assigning samples to 96/384 well plate layouts

Allows the assigning of imported sample lists (TXT or CSV) to either 96 or 384 well plate layouts. Can be used with plain lists, partially completed well locations, or fully mapped lists to produce standardised output files.

Key Features:
96 or 384 well layouts
Automatic well detection/assignment
Plate visualisation once assigned
HTML in browser use
Launch Tool
Beta
IQC HTML tracker
Quality Control Dashboard

React.js quality control monitoring dashboard for laboratory processes. Features Levy-Jennings plots, statistical process control charts, and real-time data visualization with TailwindCSS styling.

Key Features:
Real-time data monitoring
Levy-Jennings plotting
CSV data import with PapaParse
Interactive Recharts visualization
Launch Tool